Browse of TCMCG018C16534 protein

CDS

Accession Number	TCMCG018C16534
gbkey	CDS
Protein Id	XP_011653922.2
Location	complement(join(21385532..21385639,21386018..21386101,21386188..21386418,21386533..21386688,21386801..21386897,21390001..21390171,21390249..21390634,21390992..21391090,21392831..21393014,21393092..21393237,21395536..21395593,21396603..21397248,21397930..21398086,21398159..21398233,21398427..21398580,21398979..21399079,21399224..21399307,21399406..21399551,21400016..21400172,21401197..21401298,21401390..21401464,21401550..21401630,21401737..21401843,21403684..21403749,21403881..21404026,21404684..21404818,21407312..21407448,21409008..21409082,21409512..21409697,21410298..21410420,21410502..21410615,21412029..21412121,21413491..21413562,21418166..21418288,21418451..21418569,21420171..21420270,21420551..21420724,21420829..21420969,21421333..21421538,21421862..21422012))
Gene	LOC101211680
GeneID	101211680
Organism	Cucumis sativus

Protein

Length	1921aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA182750
db_source	XM_011655620.2
Definition	rRNA biogenesis protein RRP5 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCACCGCCTTCAAGAAAATCACAGGATGGCTCAAAGTTCAACAAGCATTCCAAAAAGCCATTCAATTCGAAGAAGAAAACGAGTGAAACAGCGAAACCCGAAACTGTATCGCTGCAGATTGAAGATGACGTTCCCGATTTTCCTAGAGGGGGAGGAGGTTATATGAGCCAAAACAAAGGGGAAAAAGTACGTGCCGAAGGAGATAAGGAGTTTCAGAATGATGATCTGAAGATGACAACAAAAAGGGGAAAGAAGAGAAGAAAGCATCCGTCAAATGGGGATGATTTGGAATCCTTGTTGAACAATGGTGTGGTGGGAAACCTTCCTAAATATGCAAATAAGATAACTTTAAAGAATATAAATCCAAGAATGAAATTTTGGGGAGTTGTTGCTGAAGTTAATAAGAAGGATCTTGTTATTAGTCTACCAGGGGGCTTACGTGGATTAGTATCGGCTGCTGAAGCTTTTGATCCAATTTTGGAAAAAGAAGTTGAGGATACAGAGCATGATTTACTTCCTGTCATGTTCCATGTTGGGCAACTGGTTCCATGTGTTGTGTTAAAAGTGGATGATGACAAGAAAGAATCGGGGAAGAGAAAGATCTGGCTTTCGTTACGTTTGTCTATGTTGTACAAAGATTTCACATTGGACCTTCTTCAAGAAGGAATGGTTCTGACATCATATGTGAAAAGCATTGAAGATCATGGCTACATCCTTCATTTTGGTTTGACTTCCTTCACTGGGTTTTTGCCAAAGACCAAGCAATCTGATCAATCTGAGAATGAAGTGCATGTTGGACAACTTCTTCAATGTGTTGTTAGAAGCATTGATAAAACTCGTAAAGTGGTTTATTTTAGTTCTGATCAAGATATTGTGTCCAGCAGTGTGGCGAAGGATCTAAAAGGTATTTCAATTGACCTTCTCATCCCTGGCATGATGGTTAGCGCACGAGTACAATCAACCCTTGAAAATGGGATCTTGCTATCCTTTCTCACTTATTTTAATGGAACTGTTGATATGTTTCACTTGCAAAATAGTTTTCATTCTTCAAATTGGAAAGATTTTTACAACCAGAACATGAAGATGAATGCTCGGATATTATTTATTGATCCTTCAACTAGAGCTGTGGGGTTGACATTGATTCCACATCTTGTTCGTAACAAGGCTGCACCTCCACACGTGAGAATTGGTGATATCTATGATTCTGCAAAAGTTGTTAGGGTTGATAGAGGTTTCGGCTTGCTTCTTGAAGTACCTTCTTCTCCGGAGTCAACTCCAACATTTGTTAGTGTATCGGATATGGCTGAAGAGGTTGTGAAAAAGATTGGAAAGAAGTTTAAAGAGGGGAGTCGTGTTCGTGTTCGTATACTTGGCTTTAGACATTTGGAAGGACTTGCAATTGGCACTTTGAAGGCCAGTGCCTTTGAGGGTCCAGTGTTTTCCTACTCAGATGTGAAGCCCGGGACGTTGATACGTGCTAAAGTTATAGTTGTTGATGATTTTGGTGCTATTGTGCAATTTCCTGGCGGTCTTAAAGCTCTGTGTCCTCTTAGTCACATGTCTGAGTTCGAAATTGCTAAACCTCGAAAAAAGTTCAAGGTTGGAGCTGAATTAATTTTCCGTGTGCTTGGTTGCAAGTCCAAGAGAATAACTGTTACACACAAGAAGACACTCGTAAAATCAAAATTGGAGGTTCTTAGTTCATATGCTGATGCTACTGCAGGGTTAGTGACCCATGGCTGGATAACGAAGATTGAAAAACATGGTTGCTTTGTCAGGTTTTACAATGGGGTTCAAGGTTTTGCTCCTAGATTTGAGCTTGGAATAGAACCGGGTTCTGATCCAAGTTCAACATATCATATTGGGCAAGTCATCAAATGTAGAATAACAAGCTCTACTCACTCCTCCAAGCGAATTAGCCTTAGTTTTGTAATGAAGCCTGCAAGGGTTTCTGAAGACACAAAGGTTGAGTTGGGTTGTATTGTAACGGGTGTGGTTGATGAAATAACTGAGACCCATGTAACATTGTATATAAATAGAACCGATTACTCAAGGGGAAGAATATCAACAGAACATCTGTCAGATCATCAGGCACACGCTTCTTCGATCAAGTCTGTGTTGAAGCCTGGATATCAATTTGATCAACTCCTTGTACTAGCTATTGAAGGTGAAAGTTTAATCCTATCTGCAAAACAATCTCTAATCAAATTGGCTCATATGCTTCCATCTGATTCGAGCCATGTAAATCCATATTCTATTATCCATGGATTCATTTGTAATATAATAGAAGCAGGTTGTTTTGTTCGCTTCCTAGGACGTTTAACTGGCTTTTCTCCACGAAATAAGGCTATGCAAGACCAAAAATTGTATCTACGTGAAACATATTACATTGGACAATCTGTTCGCAGTAATGTAGTTGATGTTAGTGGTGAAACAGGTAGAATCACACTTTCTTTGAAGCAGTCTACTTGCTTTTCAACCGATGCTTCCTTTATTCAGGAATTCTTTTCTACAGAAGAGAAGATTGCAAAGCTTCAATCATTAGATGAATCAAACTGGGCAGAAGAATTTGCAATTGGAAGCGTGGTTGAGGGAGAAGTTCAGGAGGTCAAGGATATTGGAGTTACTATTAGCTTTGAAAAATACCATGATGTTTTTGGTTTTATTGCACTCCATGGATTGAGTGGGTCCATAGTGGAAACAGGTTCCACCATTCAGGCTGCCGTTCTTGATGTCTCTAAAACTGAACGGCTTGTTGATTTATCCTTAAAACCTGAATTAGTTGATAAATGGGGTGGAAGTTCTAGCCGACAAACTAATAGGAAGAAACGAAAGGCAGAGGCACCTAAGGACTTGGAGATGAATCAAACTGTGCATACTGTAGTGGAAGCTGTGAAGGAGAACTATCTGGTTCTTTCACTGCCAGAGTTTGGTCATGCTATTGGTTATGCATCTACGTATGATTACAATACCCAAAGGCTTCATCAGAAGCACTTTACCGTTGGTCAAAGTGTCGTTGCCACGGTTGTGGCTCTTCCATGTCCTTCAACTTTTGGGAGGCTCCTACTGCTTCTGAAGTCAATAAGTGAGGCCATTGTTACACCTGGTTCAAAACGGTCTAGGAAGAACTCTTCATGTGAAGTGGGATCTCTGGTTCATGCTGAGATCATTGATGTTCAACCCCTTGAAATGAGATTGAAATTTGGAGTTGGATTACGTGGACGAATTCATGTGACAGAGGTTAGCAATACGCCTGATGAAGCTTCAGAAGCTCCCTTTAGTAACTTCAGAGTTGGGCAAACTGTAGTTGCAAGGATTGTTGCAGAGGCTAACCATTCAGCTAGTAAAGGGAAGGGCTATCTATGGGAGTTGTCTGTAAAACCTGAAGTTCTTAAAGATTTCAGTGCCGTGGGAGGTGAGATTGTAAATGAAGATTTGGGGTTTTCAATTGGACAACGTGTGACTGCATATGTAAGCAACGTAAATGGTGACTGGGCATGGTTAGCTGTTACTCGGCGAGTGAGTGCCCAGCTATTTATTCTTGACAGTTCTTCAGAGCCTAGTGAGCTTCAAGAGTTCTCCAAGCACTTCTATGTTGGAAAGGCTGTTTCTGGATACATATCTAACATTATTGGCGAGAAAAAAATCTTACGGTTGGTTTTGCATCATTTATCTGCCATCTCATCTGGAAAAAGTGATGAAGAAAACTCGAAGATTAGTAATTTGCCAACTGATGTTTGTAAGAAAGTTATATGTCATTTAAATGAAGGAGATATTGTTGGGGGAAGAATATCAAAAATACTTCCGGGCGTTGGTGGACTGCTCGTGCAAATCGGTCCCCATTTGTTTGGCAGGGTTCATTATACAGAACTTACAGATTGTTTGGTGCCTGATCCATTATCTGGATATAAAGAAGGACAATTTGTCAAGTGCAAGGTTATAGAAATTACCCATGCAGTCAAAGGTACAACACACATCGATTTGTCACTGCGGTCTTCAGCTGGCATCCTCTGTCAGAAAAATATTGAATGCAGCAACCATGAAAACATTGCTTCTGGACGAGTGAAGATAGAAGATATTCATGCTCATATGGAGGTCCAGGGTTATGTGAAAAATATATCGCCCAAAGGATGCTTCATTATGCTGTCACGGGGCTTGGAGGCAAAAATTCTCCTATCTAATCTATCGGATGGATATATTGATAATCCTGAAAAAGAGTTCCCCACTGGGAAACTTGTTCGTGGAAGGATATTATCCGTCGAGCCCTTGTCAAAGAGAGTTGAAGTCACCCTGAAGTCTGTGACTGAAACTGGTGCATTGAGAGGAAGTAATAATGATTTAAGAAGTTTTTCTGCTGGAGATATAATATCTGGACGGATTAAGCGGGTGGAGTCATTTGGTCTATTCATCAGCATTGATAATACGGATGTGGTTGGGCTGTGTCATGTATCAGAAGTTTCCGACGATCCTGTTGAAAGCTTAGAATTCAGATACCATGCTGGGGACACGGTGAAAGCAAAAGTATTAAAGGTGGATGAAAAAAGGCATCGTATTGCTCTGGGAATGAAGAGGTCCTACATTGGAGAAAGAAGTGAACTTTGTACAAATATGGAAGAAGAGCATGAAGATGCGGCTGATGGTGACAATTTCATTGGTGAGACTAGGTTGTCAATGGATCCAGATAGCAGTTCAACCAAGTTCAAGGATATGGATGATGACTTCGACAATATTGAACCTGAACAGCCACTTAGACTGGCAGAATCAAGAGCTTTGGTTCCCTCACTTGAGGTCACTCTTGATGATATAGATGAAACTGACATGGTTACTTTACAGTCTGAAAATAAAGAGCTGACAAGTGGCACAGACTCTAAGGAAAAGAATGATAGACGAGAGAAGAAAAAGGCTAAAGAAGAAAGGGAAATGGAAGTGAGGGCCGCTGAGGAAAGATTATTGCAGAATAATTCACCAACTACTGTTGATGAATTTGAAAAATTGGTTCGAAGCTCTCCTAATAGTAGTTTTGTTTGGATTAAGTATATGGATTTCTTTAAGGCGGACGTAGAGAAAGCCCGCTCAATAGCTGAGAGGGCTTTGAGGACGATCAATATTCGGGAAGAAAATGAAAAGCTCAATGTTTGGTTGGCTTACTTCAATCTTGAAAATGAATATGGAAATCCTAAAGAGGATGCTGTGACTAAAATCTTTCAACGAGCGTTGCAGTGCAATGATCCCAAGAAGGTTCATTTAGCATTGCTAGGTATGTATGAGAGGACAAATCAAGATAATTTAGCTGATGAGCTCCTGGACAAAATGATAAAGAGGTTCAAGCATTCCTGCAAGGTTTGGTTGAGGCGGATGGAAAGTTTGTTCAAGAAGAAACAAGTTGAAATTCAATCAATTGTGAACCGTGCCCTACTTTGCCTTCCAAAGCGTAAGCACATTAAGTATATCTCACAAACAGCTATCCTTGAATTCAAATGTGGGGTGGCAGATCGAGGTCGGTCAATGTTTGAAGGAATTCTTCGAGAGTATCCAAAGAGAACGGACCTGTGGAGCATCTATCTTGATCAAGAAATTCGTCTTGGTGATAAAGATATGATTCGTGCCCTTTTTGAAAGGGCCATTAGTTTATCTCTTGCTCCCAAGAAAATGAAGTTCTTATTTAAAAAATATTTGGAATATGAAAAGTCTGTTGGCGATGAAGAACGAATTGAATCAGTGAAACAGAAGGCATTGGAGTACGTTGAGAATACGTTAGCTTAA

Protein:   MAPPSRKSQDGSKFNKHSKKPFNSKKKTSETAKPETVSLQIEDDVPDFPRGGGGYMSQNKGEKVRAEGDKEFQNDDLKMTTKRGKKRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAAEAFDPILEKEVEDTEHDLLPVMFHVGQLVPCVVLKVDDDKKESGKRKIWLSLRLSMLYKDFTLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQSENEVHVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVAKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDFYNQNMKMNARILFIDPSTRAVGLTLIPHLVRNKAAPPHVRIGDIYDSAKVVRVDRGFGLLLEVPSSPESTPTFVSVSDMAEEVVKKIGKKFKEGSRVRVRILGFRHLEGLAIGTLKASAFEGPVFSYSDVKPGTLIRAKVIVVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKTLVKSKLEVLSSYADATAGLVTHGWITKIEKHGCFVRFYNGVQGFAPRFELGIEPGSDPSSTYHIGQVIKCRITSSTHSSKRISLSFVMKPARVSEDTKVELGCIVTGVVDEITETHVTLYINRTDYSRGRISTEHLSDHQAHASSIKSVLKPGYQFDQLLVLAIEGESLILSAKQSLIKLAHMLPSDSSHVNPYSIIHGFICNIIEAGCFVRFLGRLTGFSPRNKAMQDQKLYLRETYYIGQSVRSNVVDVSGETGRITLSLKQSTCFSTDASFIQEFFSTEEKIAKLQSLDESNWAEEFAIGSVVEGEVQEVKDIGVTISFEKYHDVFGFIALHGLSGSIVETGSTIQAAVLDVSKTERLVDLSLKPELVDKWGGSSSRQTNRKKRKAEAPKDLEMNQTVHTVVEAVKENYLVLSLPEFGHAIGYASTYDYNTQRLHQKHFTVGQSVVATVVALPCPSTFGRLLLLLKSISEAIVTPGSKRSRKNSSCEVGSLVHAEIIDVQPLEMRLKFGVGLRGRIHVTEVSNTPDEASEAPFSNFRVGQTVVARIVAEANHSASKGKGYLWELSVKPEVLKDFSAVGGEIVNEDLGFSIGQRVTAYVSNVNGDWAWLAVTRRVSAQLFILDSSSEPSELQEFSKHFYVGKAVSGYISNIIGEKKILRLVLHHLSAISSGKSDEENSKISNLPTDVCKKVICHLNEGDIVGGRISKILPGVGGLLVQIGPHLFGRVHYTELTDCLVPDPLSGYKEGQFVKCKVIEITHAVKGTTHIDLSLRSSAGILCQKNIECSNHENIASGRVKIEDIHAHMEVQGYVKNISPKGCFIMLSRGLEAKILLSNLSDGYIDNPEKEFPTGKLVRGRILSVEPLSKRVEVTLKSVTETGALRGSNNDLRSFSAGDIISGRIKRVESFGLFISIDNTDVVGLCHVSEVSDDPVESLEFRYHAGDTVKAKVLKVDEKRHRIALGMKRSYIGERSELCTNMEEEHEDAADGDNFIGETRLSMDPDSSSTKFKDMDDDFDNIEPEQPLRLAESRALVPSLEVTLDDIDETDMVTLQSENKELTSGTDSKEKNDRREKKKAKEEREMEVRAAEERLLQNNSPTTVDEFEKLVRSSPNSSFVWIKYMDFFKADVEKARSIAERALRTINIREENEKLNVWLAYFNLENEYGNPKEDAVTKIFQRALQCNDPKKVHLALLGMYERTNQDNLADELLDKMIKRFKHSCKVWLRRMESLFKKKQVEIQSIVNRALLCLPKRKHIKYISQTAILEFKCGVADRGRSMFEGILREYPKRTDLWSIYLDQEIRLGDKDMIRALFERAISLSLAPKKMKFLFKKYLEYEKSVGDEERIESVKQKALEYVENTLA